Helper struct to specialise soft and hard clipping when using seqan3::cigar_from_alignment.
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#include <seqan3/alignment/cigar_conversion/cigar_from_alignment.hpp>
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uint32_t | hard_back {} |
| The number of hard clipped bases at the back of the CIGAR string.
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uint32_t | hard_front {} |
| The number of hard clipped bases at the front of the CIGAR string.
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uint32_t | soft_back {} |
| The number of soft clipped bases at the back of the CIGAR string.
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uint32_t | soft_front {} |
| The number of soft clipped bases at the front of the CIGAR string.
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Helper struct to specialise soft and hard clipping when using seqan3::cigar_from_alignment.
A CIGAR string might have hard or soft clipping at the front or back, e.g., 2H3S100M3S2H
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The documentation for this struct was generated from the following file: